This article identifies our favourite tools which are extremely useful for anyone interested in sequence analysis, molecular modelling, molecular dynamics, phylogenetic analysis and more.
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Tag: genome
Apollo – genome annotation editor
Apollo is a collaborative, real-time, genome annotation editor. The stack is a Java web application / database backend.
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Artemis – genome viewer and annotation tool
Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses.
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JBrowse – fast, scalable genome browser
JBrowse is a fast, scalable genome browser built completely with JavaScript and HTML5. It can run on your desktop, or embedded in a website.
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Integrated Genome Browser – visualization for genome-scale data
Integrated Genome Browser (IGB) is a fast, free, and highly customizable genome browser you can use to view and explore big genomic datasets.
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Genome Workbench – rich set of integrated tools for studying and analyzing genetic data
NCBI Genome Workbench is an integrated application for viewing and analyzing sequences.
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Tablet – graphical viewer for next generation sequence assemblies and alignments
Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments.
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Ensembl Genome Browser – retrieve genomic information
Ensembl is a centralized resource for geneticists, molecular biologists and other researchers studying genomes.
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UCSC Genome Browser – interactively visualize genomic data
The UCSC Genome Browser is an on-line, and downloadable, genome browser.
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Genome Data Viewer – genome browser for exploration and analysis of eukaryotic RefSeq genome assemblies
NCBI Genome Data Viewer is a genome browser supporting the exploration and analysis of more than 730 eukaryotic RefSeq genome assemblies.
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