Apollo is a collaborative, real-time, genome annotation editor. The stack is a Java web application / database backend.
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Tag: java
Artemis – genome viewer and annotation tool
Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses.
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Integrated Genome Browser – visualization for genome-scale data
Integrated Genome Browser (IGB) is a fast, free, and highly customizable genome browser you can use to view and explore big genomic datasets.
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Tablet – graphical viewer for next generation sequence assemblies and alignments
Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments.
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ScreenStudio – streaming made easy
ScreenStudio will let you record your desktop in a full HD video files. Overlay some text or even your webcam.
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Freeplane – free mind mapping software
Freeplane is software that supports thinking, sharing information and getting things done at work, in school and at home.
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FreeMind – Java based mind mapping software
FreeMind is a free mind mapping application written in Java. It therefore runs on a wide variety of operating systems, including Linux.
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Integrative Genomics Viewer – high-performance visualization tool for interactive exploration of large, integrated genomic datasets
The Integrative Genomics Viewer is a high-performance visualization tool for interactive exploration of large, integrated genomic datasets.
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InterMine – integrate biological data sources
InterMine is a data warehouse system for the integration and analysis of biological data.
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BioJava – Java framework for bioinformatics
BioJava is a project dedicated to providing Java tools for processing biological data.
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Taverna Workbench – tools for designing and executing workflow
The Taverna workbench is an open source software tool for designing and executing bioinformatics workflows created by the myGrid project.
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geWorkbench – software platform for integrated genomic data analysis
geWorkbench (genomics Workbench) is a Java-based open-source platform for integrated genomics.
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Bioclipse – workbench for the life sciences
The Bioclipse project is a visual platform for chemo- and bioinformatics based on the Eclipse Rich Client Platform (RCP).
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Greenstone – build and distribute digital library collections
Greenstone is a comprehensive digital library creation, management, and distribution package.
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ProjectLibre – standalone replacement for Microsoft Project
ProjectLibre was founded to provide an open source replacement of Microsoft Project desktop. It offers a similar user interface.
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GanttProject – project scheduling and management software
GanttProject is a free and easy to use Gantt chart based project scheduling and management tool written in Java.
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MyCollab – Project Management, CRM and Document Management
MyCollab is a collaboration platform management. It provides the comprehensive set features of Project Management, CRM, and Document Management.
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Libreplan – project planning, monitoring and control
LibrePlan (formerly known as NavalPlan) is a web application for project planning, monitoring and control.
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Electric – Electric VLSI Design System
Electric is an electrical CAD system that can handle many forms of circuit design, including custom IC layout (ASICs), and schematic drawing.
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Chipdisco – dual-deck DJ app for tracker modules
Chipdisco is a dual-deck DJ application for tracker modules (.MOD/.XM/.S3M).The software is based on Based on IBXM by Martin Cameron.
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