BioJava is a project dedicated to providing Java tools for processing biological data.
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Tag: java
Taverna Workbench – tools for designing and executing workflow
The Taverna workbench is an open source software tool for designing and executing bioinformatics workflows created by the myGrid project.
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geWorkbench – software platform for integrated genomic data analysis
geWorkbench (genomics Workbench) is a Java-based open-source platform for integrated genomics.
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Bioclipse – workbench for the life sciences
The Bioclipse project is a visual platform for chemo- and bioinformatics based on the Eclipse Rich Client Platform (RCP).
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Greenstone – build and distribute digital library collections
Greenstone is a comprehensive digital library creation, management, and distribution package.
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ProjectLibre – standalone replacement for Microsoft Project
ProjectLibre was founded to provide an open source replacement of Microsoft Project desktop. It offers a similar user interface.
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GanttProject – project scheduling and management software
GanttProject is a free and easy to use Gantt chart based project scheduling and management tool written in Java.
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MyCollab – Project Management, CRM and Document Management
MyCollab is a collaboration platform management. It provides the comprehensive set features of Project Management, CRM, and Document Management.
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Libreplan – project planning, monitoring and control
LibrePlan (formerly known as NavalPlan) is a web application for project planning, monitoring and control.
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Electric – Electric VLSI Design System
Electric is an electrical CAD system that can handle many forms of circuit design, including custom IC layout (ASICs), and schematic drawing.
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Chipdisco – dual-deck DJ app for tracker modules
Chipdisco is a dual-deck DJ application for tracker modules (.MOD/.XM/.S3M).The software is based on Based on IBXM by Martin Cameron.
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Angry IP Scanner – fast network scanner
Angry IP Scanner (or simply ipscan) is an open-source and cross-platform network scanner designed to be fast and simple to use.
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Muon – SSH Terminal / SFTP client
Muon (previously known as Snowflake) is a graphical SFTP client and terminal emulator with helpful utilities.
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RStudio – enterprise-ready professional software for R
RStudio is an integrated development environment for R. RStudio combines an intuitive user interface with powerful coding tools.
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StatET for R – Eclipse based IDE for R
StatET is an Eclipse based IDE for R. The software offers a set of mature tools for R coding and package building.
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JGR – graphical user interface for R
JGR (pronounced ‘Jaguar’) is a universal and unified graphical user interface for R. JGR was introduced at the useR! meeting in 2004.
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OpenDJ – LDAP and DSML software
OpenDJ is a Lightweight Directory Access Protocol (LDAPv3) and Directory Service Markup Language (DSMLv2) compliant directory service.
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ApacheDS – LDAP and Kerberos server written in Java
ApacheDS is an embeddable, extendable, standards compliant open source LDAP and Kerberos server entirely written in Java.
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Makagiga – productivity tool
Makagiga is an easy-to-use, cross-platform application for doing a variety of tasks, such as text editing, todo listing, RSS reading.
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NextFractal – create amazing fractal images
NextFractal is an application for creating amazing fractal images and other algorithmically generated images.
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