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Tag: R

Natural Language Processing

topicmodels – interface to LDA and CTM models

November 23, 2025 Steve Emms Scientific

topicmodels provides an interface to the C code for Latent Dirichlet Allocation (LDA) models and Correlated Topics Models (CTM)

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Natural Language Processing

tokenizers – R package

November 23, 2025 Steve Emms Scientific

tokenizers is an R package offers functions with a consistent interface to convert natural language text into tokens.

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Natural Language Processing

textclean – collection of tools to clean and normalize text

November 23, 2025 Steve Emms Scientific

textclean is a collection of tools to clean and normalize text. Many of these tools have been taken from the qdap package

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Programming Books

34 Excellent Free Books to Learn all about R

May 19, 2025 Erik Karlsson Books, Programming

This article recommends free books which will teach you the basics of R, how to produce amazing plots, how to apply R to lots of disciplines, and how to efficiently program in R. Many of the books are open source.

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Statistics

8 Best Free and Open Source Linux Statistical Analysis Tools

November 5, 2024 Steve Emms Roundup, Scientific

We recommend the finest software for performing statistical analysis. Open source goodness at its best.

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Development

3 Easy Ways to Access R from a Python Program

October 19, 2024 Steve Emms Programming, Roundup

This roundup picks the finest software which lets you access R from within a Python program.

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Data Science

2 Easy Ways to Access Python from R

October 16, 2024 Steve Emms Programming, Roundup, Scientific

This roundup picks the finest software which lets you access Python from R.

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Data Science

basilisk – freeze Python dependencies

October 14, 2024 Steve Emms Programming, Scientific

basilisk provides a standardized mechanism for handling Python dependencies within Bioconductor packages.

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Development

pyRserve – library for connecting Python to R

October 13, 2024 Steve Emms Programming

pyRserve is a Python client for Rserve (network layer to remote R server).

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Development

PypeR – Python interface to R

October 11, 2024 Steve Emms Programming

PypeR provides a lightweight interface to use R in Python by pipe.

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Data Science

reticulate – R Interface to Python

October 10, 2024 Steve Emms Programming, Scientific

The reticulate package provides a comprehensive set of tools for interoperability between Python and R.

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Development

rpy2 – interface to use R from Python

October 9, 2024 Steve Emms Programming

rpy2 is an interface to R running embedded in a Python process.

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Static Site Generators

3 Best Free and Open Source R Static Site Generators

February 19, 2024 Eilidih Parris Internet, Roundup, Web Apps

To provide an insight into the quality of software that is available, we have compiled a list of 3 best R static site generators.

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plotting-software

ggplot2 – data visualization package for the programming language R

November 9, 2023 Steve Emms Scientific

ggplot2 is a system for declaratively creating graphics, based on The Grammar of Graphics, the idea that you can build every graph from the same few components.

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Static Site Generators

Blogdown – powerful and customizable website output format for R Markdown

November 8, 2023 Eilidih Parris Web Apps

The goal of the blogdown package is to provide a powerful and customizable website output format for R Markdown.

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Static Site Generators

bookdown – R package to facilitate writing books

November 8, 2023 Eilidih Parris Web Apps

bookdown is an R package for authoring books and technical documents with R Markdown.

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Static Site Generators

rmarkdown – dynamic documents for R

November 8, 2023 Eilidih Parris Web Apps

The rmarkdown package helps you create dynamic analysis documents that combine code, rendered output (such as figures), and prose.

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Bioinformatics

Bioconductor – tools for the analysis and comprehension of high-throughput genomic data

October 17, 2023 Steve Emms Scientific

Bioconductor is a software project which provides tools for the analysis and comprehension of high-throughput genomic data.

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Natural Language Processing

tidytext – text mining using dplyr, ggplot2, and other tidy tools

October 17, 2023 Steve Emms Scientific

tidytext is text mining for word processing and sentiment analysis using ‘dplyr’, ‘ggplot2’, and other tidy tools.

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Natural Language Processing

quanteda – R package for Quantitative Analysis of Textual Data

October 17, 2023 Steve Emms Scientific

quanteda (Quantitative Analysis of Textual Data) is an R package for managing and analyzing text.

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