Bioinformatics Archives - Page 2 of 2

Basic Local Alignment Search Tool – find regions of similarity between biological sequences

The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences.

The Taverna workbench is an open source software tool for designing and executing bioinformatics workflows created by the myGrid project.

geWorkbench (genomics Workbench) is a Java-based open-source platform for integrated genomics.

The Bioclipse project is a visual platform for chemo- and bioinformatics based on the Eclipse Rich Client Platform (RCP).

GROMACS is a molecular dynamics simulator, with building and analysis tools. It’s a versatile package to perform molecular dynamics.

Bandage is a program for visualising de novo assembly graphs. It’s written in C++ and runs under Linux, macOS, and Windows.

Jalview is a cross-platform program for multiple sequence alignment editing, visualisation and analysis. It’s written in Java.